Healthcare Data Interoperability MCP Servers

Tools for accessing, integrating, and querying healthcare data systems including FHIR servers, medical databases, clinical vocabularies (ICD-10, CPT), and health records. Does NOT include general medical information lookup, fitness tracking, or patient-facing telehealth applications.

There are 45 healthcare data interoperability servers tracked. 4 score above 50 (established tier). The highest-rated is wso2/fhir-mcp-server at 64/100 with 97 stars and 582 monthly downloads.

Get all 45 projects as JSON

curl "https://pt-edge.onrender.com/api/v1/datasets/quality?domain=mcp&subcategory=healthcare-data-interoperability&limit=20"

Open to everyone — 100 requests/day, no key needed. Get a free key for 1,000/day.

# Server Score Tier
1 wso2/fhir-mcp-server

FHIR MCP Server – helping you expose any FHIR Server or API as a MCP Server.

64
Established
2 cyanheads/clinicaltrialsgov-mcp-server

MCP server for the ClinicalTrials.gov v2 API. Allow LLMs to search trials,...

58
Established
3 JamesANZ/medical-mcp

An MCP server that provides comprehensive medical information by querying...

56
Established
4 KatherLab/STAMP

Solid Tumor Associative Modeling in Pathology

54
Established
5 erikhoward/azure-fhir-mcp-server

Azure AHDS FHIR MCP Server

47
Emerging
6 the-momentum/apple-health-mcp-server

MCP server for querying Apple Health data with natural language using DuckDB...

43
Emerging
7 the-momentum/fhir-mcp-server

FHIR MCP Server for handling medical data standard.

41
Emerging
8 DMontgomery40/Faxbot

Self-hosted, open source, fax-sending API. HIPAA compliant. This fax API...

41
Emerging
9 Cicatriiz/healthcare-mcp-public

A Model Context Protocol (MCP) server providing AI assistants with access to...

40
Emerging
10 Cadasto/openehr-assistant-mcp

A Model Context Protocol (MCP) Server to assist you on various openEHR...

39
Emerging
11 medley/fda-data-mcp

Hosted MCP server for FDA regulatory, manufacturing, and compliance intelligence.

37
Emerging
12 OHNLP/omop_mcp

Model Context Protocol (MCP) server for mapping clinical terminology to...

37
Emerging
13 AlwaysSany/health-api

A comprehensive FastAPI microservice for health-related operations,which is...

29
Experimental
14 Cadasto/openehr-server-mcp

An openEHR Model Context Protocol (MCP) Server implemented in PHP

26
Experimental
15 hkopenai/hk-health-mcp-server

This is an MCP server that provides access to health related data in Hong...

26
Experimental
16 Cicatriiz/cdisc-library-mcp-server

DXT-packaged MCP server for the CDISC Library (discovery, Biomedical...

25
Experimental
17 chia-health/chia-mcp

Chia Health MCP Server — Patient workflow integration for a licensed US...

25
Experimental
18 petrsovadina/CzechMedMCP

MCP server se 60 nástroji pro české i globální zdravotnické zdroje....

23
Experimental
19 NyxToolsDev/dicom-hl7-mcp-server

DICOM/HL7 healthcare interoperability MCP server for Claude

22
Experimental
20 zubi-wiz/regmd-mcp

MCP server for regMD — Medical Device Regulatory Intelligence. Classify...

22
Experimental
21 MOB-sys/drug-interaction-mcp

MCP server for drug-drug interaction checking. 176 evidence-based...

22
Experimental
22 stabgan/mcp-icd10

Offline MCP server for ICD-10-CM, ICD-9-CM, ICD-10 WHO code lookup with GEMs...

22
Experimental
23 Kustode-ce/medical-billing-mcp

Open-source MCP server providing medical billing knowledge (ICD-10, CPT,...

22
Experimental
24 daveremy/apple-health-mcp

MCP server for Apple Health data — reads Health Auto Export CSVs from iCloud Drive

22
Experimental
25 VVikingsson/mcp-server

MCP Server connecting live DB Schenker Shipment data to your AI agent

20
Experimental
26 u9401066/medical-calc-mcp

🏥 MCP Server with 121 validated medical calculators for AI agents. DDD...

20
Experimental
27 la1av1a/hospital-fee-mcp

건강보험심사평가원 비급여 진료비 정보를 조회하는 MCP 서버 | MCP server for querying hospital...

20
Experimental
28 David-IABB/pharmassist-mcp

Drug interaction checker & pharmaceutical compliance

19
Experimental
29 klauseduard/hl7-tools

HL7 v2.x toolkit: parser, web viewer, terminal TUI, and MCP server

19
Experimental
30 filiperochalopes/esus-pec-mcp

Servidor MCP para integração anonimizada do e-SUS PEC APS com LLM

19
Experimental
31 OMOPHub/omophub-mcp

MCP server for OHDSI OMOP medical vocabularies. Search, map, and navigate...

19
Experimental
32 K01labs/k01-mcp-server

MCP server for generating and querying privacy-preserving synthetic health...

19
Experimental
33 jem-computer/astro-mcp

a content website, a content-based MCP server, a b̶r̶e̶a̶k̶t̶h̶r̶o̶u̶g̶h̶...

18
Experimental
34 raelango/medikode-mcp-server

MCP Server for Medikode

16
Experimental
35 AiAgentKarl/health-mcp-server

Health and medical data for AI agents

14
Experimental
36 ari-json/fda-mcp-server

MCP server for FDA enforcement data — drug adverse events, recalls, 510(k)...

14
Experimental
37 AiAgentKarl/aviation-mcp-server

MCP server for aviation data — Live flight tracking, airport weather, airline info

14
Experimental
38 meghanan266/HealthMCP

Healthcare MCP server in .NET 9 exposing 12 clinical tools over HTTP/SSE and...

14
Experimental
39 devmahmud/ShasthoMCP

A Model Context Protocol (MCP) server that provides AI assistants with...

14
Experimental
40 Nobrega-Medtech/nobra_calculator

Medical Scores Calculator API For LLMs

13
Experimental
41 pickleton89/mutation-clinical-trial-matching-mcp

MCP server to query clinicaltrial.gov to identify mutation specific trials

13
Experimental
42 xSoVx/fhir-mcp

FHIR-MCP is an open-source MCP (Model Context Protocol) server that enables...

11
Experimental
43 sayeedajmal/HAPI_MCP

MCP Designed For HAPI FHIR JPA Server

11
Experimental
44 mclarkson/bptool

MCP server for recording and reading blood pressure readings.

11
Experimental
45 Namangarg-01/Clinisight

Medical tool with MCP and API facility

11
Experimental