PubChem-MCP-Server and Augmented-Nature-UniProt-MCP-Server

PubChem-MCP-Server
39
Emerging
Augmented-Nature-UniProt-MCP-Server
38
Emerging
Maintenance 6/25
Adoption 7/25
Maturity 9/25
Community 17/25
Maintenance 6/25
Adoption 6/25
Maturity 9/25
Community 17/25
Stars: 34
Forks: 10
Downloads: —
Commits (30d): 0
Language: JavaScript
License: —
Stars: 18
Forks: 9
Downloads: —
Commits (30d): 0
Language: JavaScript
License: —
No Package No Dependents
No Package No Dependents

About PubChem-MCP-Server

Augmented-Nature/PubChem-MCP-Server

A comprehensive Model Context Protocol (MCP) server for accessing the PubChem chemical database. This server provides access to over 110 million chemical compounds with extensive molecular properties, bioassay data, and chemical informatics tools.

The server exposes 30+ tools across chemical search, structure analysis, molecular descriptors, bioassay data, and safety/toxicity information—accessible via MCP's standard protocol with URI-based resource templates like `pubchem://similarity/{smiles}`. Built in TypeScript with Axios, it implements PubChem's public REST API with built-in rate-limiting compliance (5 req/sec) and batch processing for up to 200 compounds, integrating seamlessly into drug discovery workflows alongside UniProt, ChEMBL, and AlphaFold MCP servers.

About Augmented-Nature-UniProt-MCP-Server

Augmented-Nature/Augmented-Nature-UniProt-MCP-Server

A comprehensive Model Context Protocol (MCP) server providing advanced access to the UniProt protein database.

Related comparisons

PubChem-MCP-Server and ChEMBL-MCP-Server PubChem-MCP-Server and pubchem-mcp-server PubChem-MCP-Server and PDB-MCP-Server PubChem-MCP-Server and SureChEMBL-MCP-Server PubChem-MCP-Server and opentargets-mcp PubChem-MCP-Server and Uniprot-MCP

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