Rostlab/bindPredict
Prediction of binding residues for metal ions, nucleic acids, and small molecules.
Combines homology-based inference via MMseqs2 with a 2-layer CNN operating on ProtT5 embeddings to predict binding residues from single sequences alone. Integrates with the bio_embeddings pipeline and LambdaPP for 3D structure visualization, with pre-computed predictions covering 92% of the human proteome and cross-validated performance on BioLip-derived datasets.
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Language
Python
License
MIT
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Last pushed
Sep 02, 2025
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