cafferychen777/mLLMCelltype
Cell type annotation for single-cell RNA-seq using multi-LLM consensus
Employs consensus-based predictions from 10+ LLM providers (OpenAI, Anthropic, Google, DeepSeek, etc.) with iterative multi-round discussion between models to refine annotations and quantify uncertainty via Consensus Proportion and Shannon Entropy metrics. Integrates seamlessly with Scanpy and Seurat workflows, requires no reference datasets, and maintains accuracy even with imperfect marker gene inputs through noise-tolerant architecture.
635 stars. Actively maintained with 41 commits in the last 30 days.
Stars
635
Forks
54
Language
R
License
MIT
Category
Last pushed
Feb 09, 2026
Commits (30d)
41
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