ClairS and Clair3-RNA
These two tools are complements within the RNA-structure-learning category, as ClairS is a general deep-learning method for somatic small variant calling from long reads, while Clair3-RNA is specifically designed as a long-read small variant caller tailored for RNA sequencing data, suggesting ClairS could be a foundational or related somatic variant caller that Clair3-RNA then adapts or extends for the nuances of RNA-seq.
Maintenance
13/25
Adoption
9/25
Maturity
16/25
Community
12/25
Maintenance
6/25
Adoption
7/25
Maturity
16/25
Community
14/25
Stars: 105
Forks: 10
Downloads: —
Commits (30d): 0
Language: Python
License: BSD-3-Clause
Stars: 40
Forks: 6
Downloads: —
Commits (30d): 0
Language: Python
License: BSD-3-Clause
No Package
No Dependents
No Package
No Dependents
About ClairS
HKU-BAL/ClairS
ClairS - a deep-learning method for long-read somatic small variant calling
About Clair3-RNA
HKU-BAL/Clair3-RNA
Clair3-RNA - a long-read small variant caller for RNA sequencing data
Related comparisons
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