ma-compbio/Fast-Higashi
single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, tensor decomposition
31
/ 100
Emerging
No commits in the last 6 months.
Stale 6m
No Package
No Dependents
Maintenance
0 / 25
Adoption
6 / 25
Maturity
9 / 25
Community
16 / 25
Stars
20
Forks
6
Language
Jupyter Notebook
License
MIT
Category
Last pushed
Sep 12, 2023
Commits (30d)
0
Get this data via API
curl "https://pt-edge.onrender.com/api/v1/quality/ml-frameworks/ma-compbio/Fast-Higashi"
Open to everyone — 100 requests/day, no key needed. Get a free key for 1,000/day.
Higher-rated alternatives
scverse/scvi-tools
Deep probabilistic analysis of single-cell and spatial omics data
95
scverse/scanpy
Single-cell analysis in Python. Scales to >100M cells.
95
Teichlab/celltypist
A tool for semi-automatic cell type classification
76
theislab/scarches
Reference mapping for single-cell genomics
70
Teichlab/cellhint
A tool for semi-automatic cell type harmonization and integration
68