ratschlab/DeepSpot

DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and single-cell (Xenium) resolution.

56
/ 100
Established
No Package No Dependents
Maintenance 13 / 25
Adoption 8 / 25
Maturity 16 / 25
Community 19 / 25

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Stars

65

Forks

18

Language

Jupyter Notebook

License

MIT

Category

single-cell-omics-integration

Last pushed

Mar 09, 2026

Commits (30d)

0

GitHub
Single-Cell Omics Integration · 84 frameworks

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