Augmented-Nature/AlphaFold-MCP-Server

A comprehensive Model Context Protocol (MCP) server that provides access to the AlphaFold Protein Structure Database through a rich set of tools and resources for protein structure prediction analysis.

44
/ 100
Emerging

Implements an MCP-compatible Node.js server with stdio transport, offering 20+ tools that query the AlphaFold DB API—from basic structure retrieval and confidence analysis to batch processing and comparative workflows. Integrates with PyMOL and ChimeraX for visualization, supports multiple structure formats (PDB, CIF, BCIF, JSON), and exposes resources via URI templates for seamless AI assistant integration.

No Package No Dependents
Maintenance 6 / 25
Adoption 7 / 25
Maturity 15 / 25
Community 16 / 25

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Stars

31

Forks

7

Language

JavaScript

License

Last pushed

Dec 21, 2025

Commits (30d)

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